YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109008733
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKMMARLL RTSFALVFLG LFGVLGTATI SCRNEEGKAV DWFTFYKLPK RQNKESGETG  60
   61 LEYLYLDSTT RSWRKSEQLM NTTKSVLGRT LQQLYEAYAS KSNNTAYLIY NDGVPKSVNY 120
  121 SRKYGHTKGL LLWNRVQGFW LIHSIPQFPP IPEEGYDYPP TGRRNGQSGI CITFKYNQYE 180
  181 AIDSQLLVCN PNIYSCSIPA TFHQELIHMP QLCTRASSSE IPGRLLTTLQ SAQGQKFLHF 240
  241 AKSDSFLDDI FAAWMAQRLK THLLTETWQR KRQELPSNCS LPYHVYNIKA IKLSRHSYFS 300
  301 SYQDHAKWCI SQKGTKNHWT CIGDLNRSPH QAFRSGGFIC TQNWHIFQAF QGLVLYYESC 360
  361 N

Type	Start	End	Confidence
Signal Peptide	1	32	0.91
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	361	0.99