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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108999072
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERGPNAWL WACLGRTPAA GVRGRTRGLS AAGGGTRAPW RSGASADCRG RGSGCGHAAQ  60
   61 GLDFEPRIGG RRRRRSLVHP GPGAPKPRHH QGLPPQTPLC ACPRLGGAPA SGAEHPHWFN 120
  121 RQLHRLALES SGVVQSFSKR LALILTGPAA GPRSALQHNK MANQVNGNAV QLKEEEEPMD 180
  181 TSSVTHTEHY KTLIEAGLPQ KGAERLDEIF QTGLVAYVDL DERAIDALRE FNEEGALSVL 240
  241 QQFKESDLSH VQNKSAFLCG VMKTYRQREK QGSKVQESTK GPDEAKIKAL LERTGYTLDV 300
  301 TTGQRKYGGP PPDSVYSGVQ PGIGTEVFVG KIPRDLYEDE LVPLFEKAGP IWDLRLMMDP 360
  361 LSGQNRGYAF ITFCGKEAAQ EAVKLCDSYE IRPGKHLGVC ISVANNRLFV GSIPKNKTKE 420
  421 NILEEFSKVT EGLVDVILYH QPDDKKKNRG FCFLEYEDHK SAAQARRRLM SGKVKVWGNV 480
  481 VTVEWADPVE EPDPEVMAKV KVLFVRNLAT TVTEEILEKS FSEFGKLERV KKLKDYAFVH 540
  541 FEDRGAAVKA MDEMNGKEIE GEEIEIVLAK PPDKKRKERQ AARQASRSTA YEDYYYHPPP 600
  601 RMPPPIRGRG RGGGRGGYGY PPDYYGYEDY YDDYYGYDYH DYRGGYEDPY YGYDDGYAVR 660
  661 GRGGGRGGRG APPPPRGRGA PPPRGRAGYS QRGAPLGPPR GSRGGRGGPA QQQRGRGSRG 720
  721 SRGNRGGNVG GKRKADGYNQ PDSKRRQTNN QQNWGSQPIA QQPLQQGGDY SGNYGYNNDN 780
  781 QEFYQDTYGQ QWK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle