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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108995450
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPRSRKRR LAELTVDEFL ASGFDSESES ESENSPEADT RETREAARSP DEPGGSPSAS  60
   61 RRKGRASEHK DQLSRLKDRD PEFYKFLQEN DQSLLNFSDS DSSEEEEEPF HSLLDVLEEA 120
  121 SEEEDGAEEG EDGDRVPRGL KGKKNCVPVT LAMVERWKQA AKQRLTPKLF HEVVQAFRAA 180
  181 VATTQGDQES AEANKFQVTD SAVFNALVTF CIRDLIGCLQ KLLFGKAAKD SSRLGCVLSS 240
  241 PSYGLGGSVH LVSCLAETTV LAAVLQHISV LVPCFLTFPK QCRMLLKRMV VVWSTGEESL 300
  301 RVLAFLVLSR ICRHKKATFL GPVLKQMYIT YVRNCKFTSP GALPFISFMQ RTLTELLALE 360
  361 PGVAYQHAFL YVRQLAIHLR NAMTTRKKET YQSVYNWQYV HCLYLWCRVL STLGPSEALQ 420
  421 PLVYPLAQVI IGCIKLIPTA RFYPLRMHCI RALTLLSGSS GAFIPVLPFI LEMFQQVDFN 480
  481 KKPGRMSSKP INFSVILKLS NVNLQEKAYR DGLVEQLYDL TLEYLHSQAH CIGFPELALP 540
  541 VVLQLKTFLR ECKVANYCRQ VQQLLGKVQE NSEHICSRRQ RVSFGVSDQQ AVEAWEKLTR 600
  601 EEGTPLTWYY SHWRKLRDRE IQLEISGKER MEDLNFPEIK RRKVADRKDE DRKEFKDLFD 660
  661 LNSSEEDDDT EGYSERGILG PLSTRHGVEE DETLGPLGTR HGVEEDEDDS EDGDPDAEAG 720
  721 LAPGELQQLA QGPEDELEAL QLSEED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle