YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145211181, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISKTGNYT ILFTVSTNPV ARVFSVTDPI SAYAGNIYDS RGVYDVIREF KRFSITATEY  60
   61 VGENGRKYIH ISGYAGLRRI ITGTRYGASH PQMLSMGIGQ QGLSSNIVKG LKFCILFSIG 120
  121 YRTIEGIFKD EYTLAEFIGN ITMDMAKIAI VAATSFIVGV LFTATVLAGG SIIVVAGVAF 180
  181 AVGFVATAIL DHFDEKYGIS EKLIALLTKE MRKKPRTQEA NFQSILNGLG RLK

Type	Start	End	Confidence
Cytoplasmic	1	145	0.93
Transmembrane Helix	146	167	0.84
Non-Cytoplasmic	168	171	0.60
Transmembrane Helix	172	193	0.85
Cytoplasmic	194	233	0.86