YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108765350, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVLIGWL RLEGERAGLY DTATGVLIMT AANVIVVSAI MLWGVRALGR LERGRAAAEE  60
   61 GYRSVFENAS EGIFRSTPEG RLLAANPAMA RMFGYRSPEE LVSEVSDLGR QLWESPQERE 120
  121 RFVRRVLEEG SVSGFEARMR RRDGSLLWAS LNGHRVTGRD GRLVCLEGTI LDITWRRRQQ 180
  181 EALEESQRQF RDLFERSVDA LLVHDGEGNI VDCNAEACRS LGYTRQELLR MNVRDFATNL 240
  241 LRREDRTPGE PTLWERALSG EPGVVAGVHL GEHRRRDGTT FPVEVRVGPV VYGGRRMILA 300
  301 AARDITERKR IEEELREAKE QAEAASRAKS EFVANMSHEI RTPMNGVIGM AELLLDTPLT 360
  361 PEQREYARTI RSSGEALLAI LNDILDFSKI EAGRLSLERI PFEIHKEVEE VVSLLAPRAH 420
  421 AKGLELICFI EPGVPPLIKG DPFRLRQVLT NLIGNAIKFT EEGEVVVSVS LSKEEKSAPA 480
  481 GERGGEIELR FEVKDSGIGI QEEQQKHLFE AFSQADASTT RRYGGTGLGL AISRQLVEMM 540
  541 GGEIGLKSSP KEGSTFHFSA RFVLPEEEEE KSPKTPPEEG EGGGARRTRE EEERGRRESL 600
  601 AGLRVLVVDD NATNRTILCR QLEAWRMEPK SVGGAQEAIR ELEASGTFLA SSSSGYDLVI 660
  661 LDMQMPETDG LELARRIKSR LQEEEEKRGG AFSALRLMLL TSMDPQTKEK IKASGTVEAC 720
  721 LQKPVRQSQL YDAIATLFQK KKEEERPLPL PAHQKEEEKE GKERPLILLA EDNPVNQQVA 780
  781 ASMLKKLGYR VELAQNGEEA LKKLFPPPSS PPSSSGREEG GGSPKKKYAA VLMDIQMPKM 840
  841 DGLEATRRIR SKEEEGVLRL PRTPIIAMSA HAMQEDRERA LKAGMDHYIS KPVKKEQLKE 900
  901 ALERFVAATE GQKERPSSCP PGKKHREPER GGEGAALDPD SLKELDELGE GVFEELCQLF 960
  961 LEDAPRKLAG IKEALRLEAK EGGEKATSSS SSFAPREEVG RLSHALKGSA ASLGAKRLAG1020
 1021 LCQRLGEEAG GTGSEEQLLR LVWEMERELE RVRGEIAARG GGGGEERAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle