YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|107124174
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSTFKWVV GATVSAVLLT GCGFINQEKA TEQIDPPKQV TYTEGGKKEV AKKDKQGQMV  60
   61 NRELYLVDKN GYVVPQTLAI PTPKANETVK QTLEYLVKDG PVTNLLPNGF RAVIPANTTM 120
  121 TLDLKKDGTA VIDFSKEMKN YAKEEERQIV ESIAWTLTQF TEIKQVQFQI NGEKLAKMSV 180
  181 GGTPLGEGVS RANGINFDDE QVTDVTNTKP VTLYFMAQNN NKQQYYVPVT RRVAEGKEND 240
  241 YAAIIDELVK GPIHQSLLND FNPGVKLITN PKLQDGNLTL NFNENIFVNP DKNMISNYVL 300
  301 KSLVLSLTEK KGVKNISIEV NGKANLIDEK GGKLIKPVDR PENVNTGSF

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	349	0.99