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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108761023, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHLLEETPM PPDMMAGTRR LLTCLLSALL MVGCEPSGAL AKPETPHATR TQRVVVTAPP  60
   61 MRIAAGTQHS LYLSPGGDVW AWGGNGSGQL GGAETSLQGL APVRLAALEN IVSVVSGDAH 120
  121 SLALGADGSV WTWGGNSSGQ LGDGTTTDRA TPMRVAGLDS VVAVAAGDFH SLALREDGTV 180
  181 WAWGTNFHGQ LGRGHTQPGL TPEQVPGLNG VVALAAGFDF TLAVLEDGTV RAWGSNGSGQ 240
  241 LGDGTSTQRL SPVKVSELSG ITEVRAGTYH ALALGKDGGV WTWGSNASGQ LGDGTWNDRA 300
  301 VPMQVPGLER VKAVASMDSD SLALLDTGAV FAWGANGSGQ LGDGDTTDRA TPGPVPGLNA 360
  361 VASVVGGAQH ALVLRKDGTL WAWGGGLSGQ LGHGGSERHV VPAPVMRLAG VTSMATGSFH 420
  421 SLAALGDGSV WAWGRNTYGQ LGDGSTAERH AAVRVEGLGG VRSVASAAHH SLAVGMDGTV 480
  481 WAWGRNAAGQ LGDGTTLDRA RPVAVPGLTS VTAVAAGGSH VLALRSDGSV WAWGYNALGQ 540
  541 LGDGTTVDRL TPVRVSGLGA VVAVAAGSYF SMALQSDGTV WTWGEGFEGQ LGDGGGVQRL 600
  601 SPVRVEGLAN ITRVAAGSAH ALAVRGDGTV WAWGDNGEGQ LGDGSWADRF RPVQVPGLQG 660
  661 ITAVSGGRSH SMALQGDGTV RAWGYNGYGQ LGDGTLTSRV RPALIPGLTG IQALHPSHLH 720
  721 VLALHADGTL RGWGYNRFGQ LGLGAAGWSA VPVQVRGIGR VDRLSVGRAH TLMVRADGTV 780
  781 MAWGENGSGQ LGDGTSTHRT GPVSVPGVPC VRSVASGIQH SLALACDGTV WAWGANARGQ 840
  841 LGDGTTTPRV TPGLVEGLRG VVALAAGGDA SVALRADGSV WSWGGNASGQ LGDGTLTDRA 900
  901 LPAHVEHLSN AVAVAVGETH ALAVGEDGAL WAWGANGSGQ LGDGGTAPSL TPVRVKGLER 960
  961 VASVAAGRAF SVAVRDDGTA WAWGTNPSGQ LGDGTNHARS VPNQVTSLKG IRAMSAGAHH1020
 1021 VVALSADGTV WTWGDNTLGQ LGDGSSSPTG MWPRQVPELR GVEAVAAGEQ FTVAVLLDGT1080
 1081 ARAWGSNEYG QLGDGKTGPQ LTPMAVKIEG PKIRPPVRTV RAWGQHAVVQ MSDGTVQTWG1140
 1141 DNTFGQLGDG TTTRRAVPLT VYGLASVVAV SSGAWHSLAL LSDGTVWAWG ANGFGQLGDG1200
 1201 TSTPRTRPVQ VAGLGDVVAI GSGGYHALAV CSDGSVWTWG YNAFGQLGDG TAESRSLPTR1260
 1261 VEGLEGVVAV AGGDHYSLAL HSDGTLSAWG NNASGQLGDG TGTTRYSRVA VKGVDGVVDV1320
 1321 RAGATHTVAL RGDGTVWTWG DNAFGQLGDG ASGTRMRLVP RPVPNLSSVS AVGAGARHTF1380
 1381 AVALKGTVWT WGRNSHGQLG LGDNTNRTEP LRVRELSDVT VVSGGADFSL AMKRDGTVLS1440
 1441 WGSSLYGSLG LGATGHRSSP GQVALP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle