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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108759546, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTHLPPEAH TGHHPPHLPE GKTKDPVCGM FVDPQAPKGG SHVHEGHTYF FCNPKCREKF  60
   61 TAEPRKYLAP EPQPPEPAPA GTMYICPMDP EVRQDHPGTC PKCGMALEPE QPVLQTRTEY 120
  121 VCPMHPEIVR PEPGACPICG MALEPRTVTL EDAPDPEYLD MRRRFWVSVV LSLPVFVLGM 180
  181 SEMIPGQPIQ RLIPGPLMAW VQFALATPVV LWGGWPFFQR GWTSVRNRHL NMFTLIALGT 240
  241 GAAYGFSVFA TFFPGLLPHA FTGHGGHVPL YFEAAAVITT LVLLGQVLEL RARHATSGAL 300
  301 KALLGLAPKT ARLLREDGRE EDVALDGVHV GDRLRVRPGE KVPVDGVVLE GESAVDESMV 360
  361 TGEPIPSEKT PGSRVTGGTV NGTGGFVIRA ERVGRDTLLS QIVQRVAEAQ RSRAPIQRLA 420
  421 DTVSGWFVPA VVVIAVLTAF IWSMWGPEPR LAHALVNAVA VLIIACPCAL GLATPISIVV 480
  481 GMGRGAQAGV LIRDAAALEE LAKVDTLVVD KTGTLTEGRP SLTTVVAAPG FDEARLLHLA 540
  541 GSIERGSEHP LASAIVKGAE ARGAVLTETH GFKSVTGQGV TGRVDGAQVA LGNARLLEGL 600
  601 GIEAGAFLER AEALRREGQT VMFVAVDGKP AGLLGVADPV KASTPEAVQQ LRADGLRLVM 660
  661 LTGDSRTTAE AVARRLGIDE VHAEVRPEEK NAMVKRLQAE GHVVAMAGDG VNDAPALAQA 720
  721 NVGIAMGTGT DIAMESAAVT LVKGDLRGIV RARHLSRGTV HNIRQNLFFA FIYNVLGVPI 780
  781 AAGVLYPFFG LLLSPMIASA AMSISSVSVI ANALRLKRLD L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle