YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108757295, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSERAFIL VAGGRVADLA SSAHAAIFEH SRDGVLVLDA GQRIVEVNRA AERIFGPRTR  60
   61 LVGQPVGLLL PGWRPPEPRA PADAALRETE LAGHRPGGSG PAHYLRVVTL PLPGEGDGGW 120
  121 VLQLHDMTAR LEVEASLRQQ KEFFEAVVIN SPVAIITITR QFRVLSWNPE ATRLFGYSPA 180
  181 EALGKHIFEL VATEPTVLPE AEQASREVVQ RGRLRSVTRR VRKDGSVVDV ELRALPVSVG 240
  241 GRQLGFIAIY HDITDLERAR KAAEAANQAK SLFLATMSHE IRTPMNAIIG MTGLLLDRAL 300
  301 TEEQRDFVAT IRQSSEALLT LLNDVLDFSK IEAGRFEAEL RPFDLRQCVE SVLDLMAVRA 360
  361 SEKGLDLGCD LAPPLPQMLV GDASRLRQVL LNLVGNALKF TEHGGAVVSV EGLALGGTEG 420
  421 AADWELTFSV QDTGLGIPDD RRTGLFQPFN QLDASVSRRF GGTGLGLAIS KRLVEAMGGT 480
  481 IWVESEGVPG QGTTFRFTLR AQAAPQAYAV QPRQEQGLLQ GRRVLVVDDN ALFRRLLGRQ 540
  541 LQAWGLVPVE SASGMDALAQ LEAGASFDAV LIDHHMPGLD GTALAERIRQ REETRALPLV 600
  601 LVSTPGRRGN PPEGLFAGVL SRPLKDSQLY DALVSCFSQH LPQLPEPRQT RPSRAGPFPG 660
  661 ERPGDTVPLD ILLVEDNATN QKLALLVLER LGYRADVALN GRQALQALSQ KRYDAVLMDL 720
  721 QMPEMDGLEA TRRIRQELPP KAQPWVIAMT ANAMDSDREQ CFSAGMDDFL GKPIRVEALT 780
  781 AALLRCQPRR SEVAPERRVA SGAVALTPLQ TVMEGLPDAA RIPGLESAAL ARLWAELGAQ 840
  841 AAQILPELID TALHSMPALL EDAYSALGRG HADDLGRAAH TLKSNAAWFG ASALESQARD 900
  901 IELQADSGLL EDMPERLERC RAELEVTRLL LGRLRDSVLA LSGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle