YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108744252
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRSFRMXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXELSEAT  60
   61 PQVTQSLSNQ LILTTLNDLY NWARLSSLWP LLYGTSCCFI EFASLLGSRF DFDRFGLVPR 120
  121 SSPRQADLII TAGTVTMKMA PSLVRLYEQM PEPKYVIAMG ACTITGGMFS TDSYSTVRGV 180
  181 DKLIPVDVYL PGCPPKPEAI IDAVIKLRKK VAQEDFVERX NFRQIHRYYS ISHEFKSSST 240
  241 VHTGKYLQSS ERKSPPKELS EATGIPIQFI L

Type	Start	End	Confidence
Signal Peptide	1	26	0.56
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	271	0.75