YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108383506
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWVSLVRNHS SWGISKMGKS QNNTGSLLLL IILGISLGDS MPLEDMDSQE MIDLTDLGDT  60
   61 LFGNPDVETT GALVEALGVE SPLNPEELGT YHEGDILIPL SYRDARFNGT RNGILALSSR 120
  121 WPGGVVPYEI KGPFTSQELG NINHAFKEYH TKTCVRFKPR TTEKDYISIG SGKSGCWSSI 180
  181 GRLGGRQEVN LQSPNCLRTY GTPIHELMHA LGFFHEQNRH ERDSYVRVMK DNIKPEMMVN 240
  241 FEKSSSRTQY GFGVEYDYGS VMHYSPTSFT RNGQPTLKAL RATSDASQMG QRKGFSAGDV 300
  301 RKINAMYKCK V

Type	Start	End	Confidence
Signal Peptide	1	38	0.85
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	311	0.99