YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108383142
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AMAFGDYPAE YNPKVHGPYD PARFYGKADV PFGQVKLGEI GAWLGRRNKT PNAVAGAVSR  60
   61 AWWRWQHKYV FPKRAGIAPF FQLTVASMTF FYLINYTKLK HHRNYNTTKG RCPVVLHLQQ 120
  121 ILHFPQGVRE AGNHH

Type	Start	End	Confidence
Cytoplasmic	1	69	0.53
Transmembrane Helix	70	94	0.62
Non-Cytoplasmic	95	135	0.73