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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|105923218
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKDRGYDVA DTELTRSLME FRSIFGNCPD LDSLRFSISL RSNPYNKNLV IFMGTDEIRT  60
   61 ANIRAVYGQI LSKESRQGLI LILQSKMNHF AKKEPEKFPF KVKVFQKMFS VDRKVFPLTG 120
  121 KCFPLTNFPN GKQTQESLES GFPESEFRKT NMAKVKSSSA LLAHHHPQPT HTKAHTHTFF 180
  181 FYSRKPHLPE SVFCGSRALS ELYISCFHAS PALFVFALVF FLFYRNFVKF GYKVFLRLIY 240
  241 RRRYCLQVYE RPGWGYDVFL SFRGEDTRKN FTDHLYTALH HARIHAFRDD DELRRGEEIS 300
  301 LQLLKAIQES KISIVVFSKG YASSTWCLAE LEKILDCRHT TGQIVLPVFY DIDPSDIRKQ 360
  361 TGSFAEAFDR HEERFKEEME KVQKWRKALM EAANLSGLDL RSFANGHESK LIQKIVEEVS 420
  421 SKLNPRFLFD DMPLKRLKTT MISGGGLLDD AEEKQITNRA VRDWLAEYKD AVYEADDFLD 480
  481 EIAYEALRQE LEAEAQTFIK PLEIMGLREI EEKSRGLQES LDYLVKQKDA LGLINRTGKE 540
  541 PSSPKRRTTS LVDERGVYGR GDDREAILKL LLSDDANGQN LGVVPIVGMG GAGKTTLAQL 600
  601 VYNHSRVQER FGLKAWVCVS EDFSVSKLTK VILEGFGSYP AFDNLDKLQL QLKERLRGKK 660
  661 FLLVLDDVWD EDYAEWDNLL TPLKCGAQGS KILVTTRNES VATVMRTVPT HYLKELTEDS 720
  721 CWAVFATHAF RGENPNAYEE LQEIGRAIAR KCEGLPLAAI TLGGLLRTKR DVEEWEKILK 780
  781 SNLWDLPNDD ILPALRLSYL YLLPHMKQCF AYCAIFPKDY SFQKDELVLL WMAEGFLVHS 840
  841 VDDEMEKAGA ECFDDLLSRS FFQQSSASPS SFVMHDIMHD LATHVSGQFC FGPNNSSKAT 900
  901 RRTRHLSLVA GTPHTEDCSF SKKLENIREA QLLRTFQTYP HNWICPPEFY NEIFQSTHCR 960
  961 LRVLFMTNCR DASVLSCSIS KLKHLRYLDL SWSDLVTLPE EASTLLNLQT LILEYCKQLA1020
 1021 SLPDLGNLKY LRHLNLQRTG IERLPASLER LINLRYLNIK YTPLKEMPPH IGQLAKLQKL1080
 1081 TDFLVGRQSE TSIKELGKLR HLRGELHIGN LQNVVDARDA VEANLKGREH LDELRFTWDG1140
 1141 DTHDPQHITS TLEKLEPNRN VKDLQIDGYG GLRFPEWVGE SSFSNIVSLK LSRCTNCTSL1200
 1201 PPLGQLASLE YLSIQAFDKV VTVGSEFYGN CTAMKKPFES LKTLFFERMP EWREWISDEG1260
 1261 SREAYPLLRD LFISNCPNLT KALPGHHLPS LTTLSIGGCE QLATPLPRCP IINSIYLRDA1320
 1321 SRTLGWRELD LLSGLHSLYV SRFNFQDSLL KEIEQMVFSP TDIGDIAIDG VASLKCIPLD1380
 1381 FFPKLNSLSI FNCPDLGSLC AHERPLNELK SLHSLEIEQC PKLVSFPKGG LPAPVLTQLT1440
 1441 LRHCRNLKRL PESMHSLLPS LNHLLISDCL ELELCPEGGF PSKLQSLEIW KCNKLIAGRM1500
 1501 QWGLQTLPSL SHFTIGGHEN IESFPEEMLL PSSLTSLTIH SLEHLKYLDY KGLQHLTSLT1560
 1561 ELVIFRCPML ESMPEEGLPS SLSSLVINNC PMLGESCERE KEQYAQDKID LLAPSGF

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