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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84627379, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDLERPLL GPDNFSREGI DLEKLPLEQV FEELRTSKEG LSDEDAEERL NIFGPNKLEE  60
   61 KRENKFIKFL GFMWNPLSWV MEAAAIMAIA LANGGGQGPD WQDFVGIVCL LLINSTISFI 120
  121 EENNAGNAAA ALMARLAPRT KVLRDGRWQE KDAAILVPGD IISIKLGDII PADARLLEGD 180
  181 PLKVDQSALT GESLPVTKKT GDEVFSGSTC KHGEIEAVVI ATGVHSFFGK AAHLVDSTQV 240
  241 TGHFQKVLAS IGNFCICSIA MGMILEIIVM FPVQNRSYRT GINNLLVLLI GGIPIAMPTV 300
  301 LSVTLAIGSH RLSQQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNRLTID RNLIEVFQKD 360
  361 MDKDMVVLLA ARASRLENQD AIDAAVINML ADPKEARANI REVHFLPFNP VDKRTAITYI 420
  421 DSDGKWYRAS KGAPEQILTL CQEKQQIAAK VHTIIDKFAE RGLRSLAVSF QEIPENSKES 480
  481 PGGPWQFCGL LPLFDPPRHD SAETIRRALN LGVCVKMITG DQLAIAKETG RRLGMGTNMY 540
  541 PSCSLFGRDK DETEALPVDE LIEKADGFAG VFPEHKYEIV KILQMNEHVV GMTGDGVNDA 600
  601 PALKKADIGI AVADATDAAR SAADLVLTEP GLSVIVSAVL TSRAIFQRMK NYTIYAVSIT 660
  661 IRIVLGFMLL ALIWKYDFPP FMVLIIAILN DGTIMTISKD RVKPSPRPDS WKLNEIFATG 720
  721 VVLGTYLALV TVLFYWLADS TQFFEAHFHV KSLSGSSEEM SSAVYLQVSI ISQALIFVTR 780
  781 SQSWSFTERP GALLMFAFVV AQLVATLIAV YAHISFASVR GIGWGWAGVI WLYSLIFYIP 840
  841 LDIIKFAVCY ALTGEAWNLL FDKKTAFTSK KDYGREDREA QWVLSQRSLQ RVISPEFEPR 900
  901 SRRPSMIAEQ AKRRAEITRL RELYTLRGHI ESVARLKNLD LNKIQTAHTV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle