YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157412143
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTCLYSTNP GEMMFFITKL LLPIMIVVFP VASWGNSTTF EAKVVKIVDG DTITALDAQN  60
   61 TTIKIRMYGI DAPESKQAFG QKAKQALTTA IATKIVTVID HGTDIYGRML GTIWLDGYDI 120
  121 NASMVDSGYA WVYRFEDNAI VPGYIKYESA AQKEAKGLWA DTNPVPPWQW RQANEKPRKV 180
  181 KEKK

Type	Start	End	Confidence
Cytoplasmic	1	14	0.46
Transmembrane Helix	15	35	0.83
Non-Cytoplasmic	36	184	0.58