YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|99867111
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLRLPCCS ASCIATMVSG NSAQWARVML VVWHLYVLST ALTRPDRKVT FHPGLLMQPS  60
   61 FNCLQELKMA VSLVKGGNVS LTKEAPTMNI AMVGLGWDAR VTDGQAFDLD ASVFAVGEDG 120
  121 KVLSDAHFIF FNNKTSPDGA VEHQGDNRTG EGDGDDEQVK IDLTKVSADI KKLVFAVTIY 180
  181 DAEARKQNFG MVSNSFMRVY NNDNGTEIAR FDLSEDASTE TAMVFGELYR HGAEWKFKAV 240
  241 GQGFAGGLAA LASQHGVNI

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	259	0.99