YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95113355, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLANSTMT QNSPPVRIDF NTPELQRKRR MRALKDRLTR WYVLVGGLAV LAAITLIFFY  60
   61 LAYVVLPLFQ GAELTSKKAL EPTWLQQDAG KPLMIALEEQ NLVGMRVSDK GQALFFDTKT 120
  121 GGELKRVDLP LPAGTQVSSI STDQPGSPLV VLGLSNGQAL VFHHTYKITY PDNKKTIEPG 180
  181 IDYPYGQDLF TLDSEGRALE HVSVNVNGDT LLLAGSTGAH LQVIELSRTE NMMTDEVTIE 240
  241 QNRIELPQMT EVVKNIFIDP RQQWLYVVNG RATADVFSLR DKSLNGRYKL LEDGNAEITA 300
  301 STQLVGGISL IFGDSKGGLS QWFMARDPDG ESRFKLIRSF QLGKAPVVQI DAEERRKGFV 360
  361 ALDSEGKLGV FHSTAHRTLL VEPVAEGAGI LALSPRANRI VIEQGGKLLP LSLRNPHPEI 420
  421 SFSALWGKVW YENYDEPKYV WQSTASNTDF EPKLSLSPLT FGTLKAAFYA MILAAPLAIA 480
  481 AAIYTAYFMA PGMRRKVKPV IELMEAMPTV ILGFFAGLFL APYLEGHLPG VFSLFVIMPV 540
  541 GILLAGFGWS RLPESIRLRI PDGWEAAILI PVILVIGWFA LYMSPFLESW FFAGDMRLWI 600
  601 TNDLGITYDQ RNALVVGIAM GFAVIPNIYS IAEDAVFSVP RSLTLGSLAL GATPWQTLTR 660
  661 VVILTASPGI FSALMIGMGR AVGETMIVLM ATGNTPVMEL NLFEGMRTLA ANVAVEMPES 720
  721 EVGGSHYRVL FLAALVLLLF TFVMNTLAEL IRQRLRKKYS SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle