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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95113215
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAAPALLAE DINHRYGDIQ ALRDVAFSLP AGTRCGLIGP DGAGKSTLLG LIAGVKRLQQ  60
   61 GELQVLGGPI RQRRHRTALY PRVAFMPQGL GNNLYPELSI RENIQFFATL FGLGRAECRE 120
  121 RMASLLRATD LERFAERPAG KLSGGMKQKL GLCCALIHEP DLLILDEPTT GVDPLSRRRF 180
  181 WELVEQVRVQ RPQLTLLVAT AYMEEAEQFE HCLMLDGGRL LAAGPSQELA AVTASGKLDD 240
  241 AFTHFQGAGR EQPAPLHIPP HEADDGPVAI EAHDLTLRFG DFTAVNKVSF AIGRGEIFGF 300
  301 LGSNGCGKTT TMKVLTGLMP ASEGSASLLG RPVDAGDLAT RKRVGFMSQS FSLYGELSTR 360
  361 QNLELHARLF DLAKADSAPR IAELIERFDL GAIADQPSGA LPLGLRQRLS LAVAVLHRPE 420
  421 VLILDEPTSG VDPAARDGFW RLLVELSREQ GVTIFLSTHF MNEALRCDRI SLMHAGRVLA 480
  481 CDTPQALQRR FGGDTLEDAF VRCLEQAQDT PTQAQAETAL QQAGTPPPPM RQAFSLRRLL 540
  541 AVASREGKEL LRDKVRLAFA LLGALFMMVI FGYGISLDVE NLAFAVYDQD QSTQSRAYLE 600
  601 AFRGSRYFAE QAPIRDARQL HQRLQRSEIK LALEIPPGFG RDLHAGRQPV VAAWLDGGMP 660
  661 FRAETSRNYV EAVHQANLEQ LAALSPHPVS RQQPVRLETR FRYNQDVVSV NAIGPGVMAL 720
  721 ILAFIPAMLT ALGIVREKEL GSITNFYATP LTRLEFLLGK QAPYLAVSLV NLALLVAMNR 780
  781 WLFGVPLKGS PLALACGGLA YLLATTSLGL LISAFTRTQI AAILGTMIIT SLPTIQFSGL 840
  841 IVPRSSLDGS AALMGQLFPA GYFLDIAVGT FTKALGLREL WPQCLILLGF FAAFTGLSLA 900
  901 MLKKQEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle