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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95113006
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPFAAPAPP SCPCADFNKM TKNLKFSHKI LLAAALVVAV AFTCFVLFND YRQRQSLRSD  60
   61 TESTLQSLGN LTAGNIRTWL DSRIQLVNSV AQQVAVDGPG KSSLDRILAL PVYGSNFILT 120
  121 YFGGQDGSMQ SVPVGNRAAD YDPRVRGWYK AASAAGQTIV TEPYISVSAG KLVITLATPV 180
  181 QQGGRMIGVS GVDTDLQTIS NLINTLDFGG RGHAFIVNGE GKVLIHPKAE LALKALADVY 240
  241 PGSDLRIGSG LKEVEVDGRK QFISFTHVDG VPSADWYVAL VLDQDAAFAM LGELRTSAVV 300
  301 ATLIAVVVII ALLGLLIRVL MEPLHIMGRA MRDIAEGEGD LTRRLNIHAQ DEFGSLAQSF 360
  361 NRFVERIHES IREVASATGQ VNAVAGQVVN ASNASIHNAD QQSSRTSSVA AAINQLGAAA 420
  421 QEIAQNAALA SQHSSAARGL AEEGQQVVGE TIDVMNQLSA RISDASGNIE TLNNHTANIG 480
  481 QILDVISGIS QQTNLLALNA AIEAARAGEA GRGFAVVADE VRNLAHRTQD SAQQVQRLIE 540
  541 ELQAGAQVAV STMNQSQAHS DRSVGIANQA GERLGSVTQR IGEIDGMNQS VATATEEQTA 600
  601 VVESINVDIN EINTLNQEGV HNLQSTLRAC TDLEHQVERL KHLVGSFRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle