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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|104783767, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQQIRLKDH EKDARLVRNR VVVGAVAVVA LVCVLIARLY FLQVIQYDYH STLSENNRVH  60
   61 VQPIPPTRGL IFDRNGVVVA DNRPSFSLVM TRERAGNPGK WQDVLDVIVE VLELTPDDRA 120
  121 LFEKRMKQGR RPFEPVPILF ELNEEQIARI AVNQFRLPGV EVAAQLVRHY PQGAHFAHSV 180
  181 GYVGRINEKE LKTLDPVNYS GTHHIGKTGI ERFYEPELHG QVGYEEVETN ARGRVLRVLK 240
  241 RTDPKPGKDI VLSLDIKLQE AAEQALGGRR GAIVALDPRT GEVLAMVSQP SFDPNLFVTG 300
  301 ISFKAYAELR DSIDRPLFNR VLRGLYPPGS TIKPAVAIAG LDSGVVTAGS RVFDPGYYQL 360
  361 PNYDHKYRNW NRTGDGWVDL DVAIMRSNDT YFYDLAHKMG IDRLSSYMNK FGIGQKVSLD 420
  421 MFEESPGLMP SREWKRATRR QAWFPGETLI LGIGQGYMQA TPLQLAQATA LIANKGVWNR 480
  481 PHLAKTIEGQ PPVDENPMEN IVLRDKSDWA KVTHGMEQVM HGARGTARKA ALGSIYRIAG 540
  541 KSGTAQVVAI KQGEKYDRNK LQERHRDHAL FVAFAPAEDP KIVVSVMVEN GESGSGVAAP 600
  601 VVRQVMDAWL LDENGRLKPE FGPATVAQEP AP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle