YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95112751
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREFFTVNTA KLLTCLAVGL VLASCSSSRP APQTGGNTVR AQPGLDINRA HKDGAPWWDV  60
   61 DVNKIPDATP TVHTGNYKAN PYTVMGKTYY PMQDSRSYRA EGTASWYGTK FHGQNTANGE 120
  121 LYDLYGMSAA HKTLPLPAYV RVTNLANGRT VILRVNDRGP FYSDRIIDLS YAAAKKLGYA 180
  181 EIGTAHVRVE GIDPQQWWAQ RGQQPPLMLK EPQVAQAQPI PASTGRIEQW TPPPQQHAAP 240
  241 VVPVQVGGNN VPNGNGGSFL QVGAFANPDA AELLRSKLST MVSAPVFISS IVRNQQTLHR 300
  301 VRLGPINSQG EIQQAQDSIR LANLGQAKVV TD

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	332	0.99