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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95112648
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTRNPRTN KQRPTGRTRA WLGWALKLSL VGLVVIAGFA VYLDATVQEK FSGKRWTIPA  60
   61 KVYARPLELF VGQKLSRNDF LTELDALGYR RESAANGPGA ASVNGNDVEL NTRGFQFYEG 120
  121 MEPAQYVRVR FSGDYVAGLS GANGVKLDVV RLEPLMIGGI YPKNLEDRIL IKIDQVPPYL 180
  181 LETLIATEDR DFYSHFGVSP KSIARAVWVN TSSGAMRQGG STLTQQLVKN FFLTNERSLS 240
  241 RKLTEAMMAV LLEMHYDKRE ILEAYLNEVF VGQDGQRAVH GFGLASQFFF SQPLQELKLH 300
  301 QIALLVGMVK GPSYYNPRRY PERALQRRNL VLDLLAEQGV VGQDVVDAAK KMPLGVTKRG 360
  361 SLADSSFPAF LDLVKRQLRQ DYRDEDLTEE GLRIFTSFDP ILQMKAETAM SETFKRLAGR 420
  421 KGADEVESAM VVTNPETGEV QALIGSRQSG FAGFNRAIDA VRPIGSLVKP AVYLTALEQP 480
  481 SKYTLTTWVQ DEPFSVKGAD GQVWRPQNYD RRPHGTIYLY QGLANSYNLS TAKLGLEVGV 540
  541 PNVIKTIGRL GVQVDWPAFP SMLLGAGGMS PMQVATMYQT IANGGFNTPM RGIRSVLTAE 600
  601 GEPLKRYPFQ IQQTFDPGAI YLVQNAMQRV MREGTGRSVY SVLPSSLTLA GKTGTSNDSR 660
  661 DSWFSGFSQD LLAVVWLGRD DNGKTPFTGA TGALQVWTSF MKKADPLPLD MPQPDNVVKS 720
  721 WIDPYSGQGS DGSCPGAVQM PYIRGSEPAA GATCGGEQNP AESVMDWVKG WMN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle