YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|104783097, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPFKGQTGL KRIFNAAGYS LDGLRTAFKG EAAFRQLVLL NVLLIPTAFW LPVSRVERAI  60
   61 LIAVCLLGLI VELLNSAVEA AIDRISLERH PLSKNAKDMG SAAQLVAMSM VAVVWGVILL 120
  121 G

Type	Start	End	Confidence
Cytoplasmic	1	32	0.94
Transmembrane Helix	33	52	0.91
Non-Cytoplasmic	53	58	0.82
Transmembrane Helix	59	78	0.96
Cytoplasmic	79	98	0.86
Transmembrane Helix	99	119	0.94
Non-Cytoplasmic	120	121	0.81