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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95111808
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAVVDNAP AKSGPPAAKP PLFGMAFLEN ISQMPMLRQV GLLVGLAASV AIGFAVVLWS  60
   61 QQPDYRPLYG SLAGMDTKQV MDTLASADIP YHVEPNSGAL LVKADDLSRA RLKLAAAGVA 120
  121 PSDGNVGFEL LDKEQGLGTS QFMETTRYRR SLEGELARTV SSLNNVKAAR VHLAIPKSSV 180
  181 FVRDERKPSA SVLVELYPGR ALEAGQVMAI VNLVATSVPE LDKSQVTVVD QKGNLLSDQL 240
  241 QDTALSMAGK QFDYSRRMEG LLTQRVHNIL QPVLGNDRYK AEVSADVDFS AVESTSEQFN 300
  301 PDQPALRSEQ SVNEQRASSQ GPQGVPGALS NQPPAGASAP ENARAAATPA GAIQPGQPLV 360
  361 DANGQQIMDP ATGQPMLAPY PSDKRQQSTK NFELDRSISH TRQQQGRLTR LSVAVVVDDQ 420
  421 VKLDAASGEA TRTPWGAEDL ARFTRLVQDA VGFDASRGDS VTVINVPFAA DRGDELVDIP 480
  481 FYSQPWFWDI VKQVLGVLFI LVLVFGVLRP VLTNITGGGK QAATDSDMEL GGMIGLDGEL 540
  541 ANDRVSLGGP TSILLPSPSE GYEAQLNAIK GLVAEDPGRV AQVVKEWINA DE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle