YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|104782820, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNRAITAK LSRVDKAAIL LLSLGETDAA QVLRHMGPKE VQRVGVAMAQ MGNVHREQVE  60
   61 QVMSEFVEIV GDQTSLGVGS DGYIRKMLNQ ALGEDKANGL IDRILLGGNT SGLDSLKWME 120
  121 PRAVADVIRY EHPQIQAIVV AYLDPDQAGE VLSNFDHKVR LDIVLRVSSL NTVQPAALKE 180
  181 LNQILEKQFS GNSNAARTTL GGIKRAADIM NFLDSSVEGA LMDAIREIDS DLSEQIEDLM 240
  241 FVFNNLADVD DRGIQALLRE VSSDVLVVSL KGADEKVKDK VFKNMSKRAS ELLRDDLEAK 300
  301 GPVRVSDVET AQKEILTIAR RMAEAGEIVL GGKGAEEMI

Type	Start	End	Confidence
Signal Peptide	1	29	0.93
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	339	0.99