YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95111796
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.84
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRAVTAFAA LLVSEAVIAA EPATVVVPAA TSGSVSGQLA QMVFGLLLVV GLIFFLAWLL  60
   61 RRMQGTAQRG APVIEIVGSR AIGPRDRLLL VQVGKEQILI GHTPGSIEAL HVLAEPVEVP 120
  121 AGARQAAPEF AQRLLELMGK DHKDKK

Type	Start	End	Confidence
Signal Peptide	1	19	0.84
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	38	0.87
Transmembrane Helix	39	60	0.93
Cytoplasmic	61	146	0.98