YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95111152
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSFDARAF RRALGNFATG VTVITAADAA GRKVGVTANS FNSVSLDPPL VLWSIDKRSS  60
   61 SHAVFEAAGH FAVNVLAADQ VDLSNAFARP SDDRFAGIEY EVGEGGAPLL ADCAARFRCQ 120
  121 TFQQLDGGDH WILVGRVLAF DDFGRSPLLY HQGAYSMVLP HPRMAPRGDD RSHFQGRLQH 180
  181 NLYYLMTQAL RAYQGDYQPR QLATGLRTSE ARMLMVLEHD AGLAPADLLR EVAMPEREVG 240
  241 EAVANLTRKG LVAEDNGRVC LTEDGREATE GLWGIAQTQQ EQVFGQFSHE QLDTFKTVLK 300
  301 AIIAR

Type	Start	End	Confidence
Signal Peptide	1	29	0.86
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	305	0.99