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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|104782061, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.61
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLRQLSIQ WKITLLAGLC LAAIVTLLVG LSLYRMDHSS DLVKASSMKM LTEAAQSRIE  60
   61 SQGEVQALNI RRQFMDAYQY GAGFARQVLF LREQAEKRFL DAYDLRQDMT AQVRAALQAN 120
  121 PDLLGLSLVF EPGALDGKDK LFAGQSELGS NETGRFALYW SQPRAGQLTS MALPEHDMAN 180
  181 TEIGPSGQPA NTWWVCPRSS GQVCVVEPYF YDIDGQRVLM TSIVFPLKAN GKVIATLSID 240
  241 INLNSLQALS QTASRSLYEG RTTVGILSPV GLLAGYSADA TKLAQRFDQV DRAQGAEMVR 300
  301 KLGEGKLQIL HDQQRLKVLA AFEPIPGGKP WGVLLDVPES ALTGPAETLK VELDALNTSG 360
  361 TLLELGLGLA AAIAGLLLVW LMARGVTRPI LGVASMLKDI ASGEGDLTRR LQYAKQDELG 420
  421 ELAGWFNRFL DKLQPTIAEV KRSVQAARGT ADQSAAIAAE TSAGMEQQYR QVDQVATASH 480
  481 EMSATAQDVA RSAAQAAQAA READQATREG LAVIDRTTTS IDTLAADMSS AMAQVEGLAQ 540
  541 NSEKIGSVLE VIRSIAEQTN LLALNAAIEA ARAGEAGRGF AVVADEVRNL ARRTQESVEE 600
  601 TRQVIEALQA GTQVVVGAMD SSHRQAQGGV EQVGQAVTAL QRIGQAVTVI TDMNLQIASA 660
  661 AEEQSAVAEE INSNVATIRD VTESLSGQAN ESARVSQSLN SLANQQQGLM DQFRV

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Created and Maintained by: Michael Riffle