YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95110899
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLLSTLLI LAALQGCGLR EPMPAEQDAE TPTLTPRAST YYDLINMPRP RGRLMAVVYG  60
   61 FRDQTGQYKP TPASSFSTSV TQGAASMLMD ALNASGWFVV LEREGLQNLL TERKIIRASQ 120
  121 KKPDVAENIQ GELPPLQAAN LMLEGGIIAY DTNVRSGGEG ARYLGIDISR EYRVDQVTVN 180
  181 LRAVDVRTGQ VLANVMTSKT IYSVGRSAGV FKFIEFKKLL EAEVGYTTNE PAQLCVLSAI 240
  241 EAAVGHLLAQ GIERRLWQVA ADGAGDKALL DKYLSQYQQP

Type	Start	End	Confidence
Signal Peptide	1	18	0.97
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	280	0.99