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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|104780988, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKFRHKIL LSACGVVVLA FALFTLYNDY LQRNTIRQNI EASVRQAGLQ TASSVQNWMS  60
   61 GRILVLENLA QDIAQQGAGN NIPGLVDQPS YTSNFQFTYF GQSTGLFTQR PDAKMPDGYD 120
  121 PRQRPWYTQA VAANQTMLTP PYQAAVGGLV VTIAMPVKAK SSGELIGVVG GDLSLNTLVD 180
  181 IINAVDFGGI GHAFLVDRNG QVIVSPNKER VMKNLKDIYP GSPLRVEPGI QEVSLDGKDR 240
  241 IISFAPVEGL PSAQWYIGLS IDKEKAYAPL SQFRTSAIIA MLIAVAVIAG LLGLLIPVLM 300
  301 RPLTTMGRAM QDIAEGEGDL TRRLVVEQKD EFGELATSFN RFVERIHASI SEVSSATRLV 360
  361 HDLSEKVVGA SNASLTGSEE QSMRTNSVAA AINELGAATQ EIARNAADAS QHASGASEQA 420
  421 NGGREVVEEA ISAMTALSQR ISESCEQIET LNASTDEIGK ILDVIKGISQ QTNLLALNAA 480
  481 IEAARAGEAG RGFAVVADEV RNLAHRTQES AEEIHRMITS LQVGSREAVH TMNTSQVSSE 540
  541 QTVQVANQAG ERLASVTQRI GEIDGMNQSV ATATEEQTAV VESLNLDITQ INALNQQGVE 600
  601 NLNETLRHCD ALSQQAGRLK QLVGSFRI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle