YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95108383, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLITALLL LTLAGCSSGL RIDRSHPSAN QDSRIQFVVL HYTNASLERS LALLTHGEVS  60
   61 SHYLIGDGPA TVYQLVDENR RAWHAGDSQW QGRTWLNSSS IGIEIVNQGY TDTPNGRVWH 120
  121 PYSEAQVQSL IALLKDIVKR NNIDPRHIIG HSDIAPLRKL DPGPLFPWKR LADAGLGVWP 180
  181 EAGAVARQQA YFEVNPPSIG WYQQQLVRFG YAIEQTGTLD VSTRHVIAAF QMRFRPQRFD 240
  241 GMPDAQTAAM LQVLNRKR

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	258	0.99