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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|93211089
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTRSWRKVL LQWIGECHFI ESNYITLEQS DLDSFFSVFI QKIQETETVK GKNELQDQPP  60
   61 EQSPLVQEFL AHNYPEFIAQ QDDKEVDLPL DCLYVYTLLL HYSCVKKPSL FFHNICNKLP 120
  121 ELTQTCIASF FRETVDRLLT REYLSQAIAN VAVVYRQGVS TSVSPCLPSS SLSPDPRSDD 180
  181 APCPSTPSSS SSQQSSSTPQ LRNHREQLRL NGCEMPPPST PKTELLEQRT KELRGIRTQL 240
  241 EVVRYEKALL EEQQMEKDEL IKVLNKEKMM AKMELEKLRN VKLTEEHHDN ESHHIMPYEF 300
  301 EHMKGCLLKE IGLKESLIAE ITDKLHDLRV ENSELSEKLN LAGKRLLEYT DRIRFLESRV 360
  361 DDLTRIVSSR DVMISSLESD KQELDKCLKE ARDDLHNRIE VLNASSDLLD CSLSPNTTPE 420
  421 NLASSVIDKQ LREKEHENAE LKEKLLNLNN SQRELCQALS SFLQKHNIDH EFPVEWTSSS 480
  481 LLSTISAIES KFVNTLEKST QMKKECDVQS VCVEKLLEKC KLLSVSLGCQ PKELDGFEAT 540
  541 IPEAMESGFE SSRECETILS CCHMKVVDIA SKNNDLELDN ERLNDKCAEL KSIIDRGDQH 600
  601 LADINLQLTE KEKQIKDVGA EIQELRKRNI NLENMLSQIT DKEASAASHA QHLKQCGELL 660
  661 RAKYEVCRNE LIAKNAAQDE LVRMMMVPDG ETLNGRVRQL IDLEMMHDEH NKMYAQMLKQ 720
  721 LNELSAKHDN MTHSHLDFVK RTEIELETKN AQIMAFDEHN NHFDRFLTRI FTLLRSRNCP 780
  781 KSTTMGSATN FLESMHIEKR FENIEMLIEG QLLSADDLKR ELDDLRSKNE ELAKQNINGI 840
  841 IKRNKFITSL EVNTEKVKQY ITDLEEEAFK RKQKVVQLEN TLSKEQSNAK EMAQRLDIAQ 900
  901 QEIKDYHVEA IRFINTIRDR LQQDFNGVNT PQQLGTCMTE FLKMYDQMEV RYEESSSLVE 960
  961 KLTESQAKLE MQVAELQVEL ENKDTNQHSG ALIKQLNDTI QNLEKVNAKL SEDNTVSHTV1020
 1021 HSKLNESLLK AQKELDLRAK IIENLEASER NLSMKLCELK DLKNKLKSSD EKIAQIKETY1080
 1081 EEQIKALQAK CDMEAKKNEH LERNQNQSLT QLKEDALENC VLMSTKLEEL QAKLQEGQQL1140
 1141 VDSQKLELDM NRKELALVKS AYEAQTKLSD DLQRQKESGQ QLVDNLKVEL EKERKELAHV1200
 1201 NSAIGAQTKL SDDLECQKES GQQLVDNLKV ELDKERKELA QVKSVIEAQT KLSDDLQRQK1260
 1261 ESALQLVDNL KVELDKERKE LAKVTSVIEA QTKLSDDLQR EKESAQQLVD NLKVELDKER1320
 1321 KELAQVKSVI EAQTKLSDDL QRQKESAQQL VDNLKVELDK ERKELAQVNS AFEAQTKLSD1380
 1381 DLQRQKESAQ QLVDNLKVEL DKERKELAQV KSVIEAQTKL SDDLQRQKES AQQLVDNLKM1440
 1441 ELDKERKELA QVKSAIGAQT KLSDDLECQK ESVQQLVDNL KVELEKERKE LAKVNSAFEA1500
 1501 QTKLSDDLKL QKEDAQREVF LVKERLVKEK REFEVKLATL EDLIETMEMR CTQMEEERAT1560
 1561 AYEQINKLEN RCQEKDNVKS NQLQVETFKV ECLHHQLKSE MATHNSLVED LNRKLAEKVS1620
 1621 KLDFVQSRLM TEIAEHNQVK DQLAQITDIP KVVELQHRLE AETAEREEAQ NKLAVVTGRL1680
 1681 DEITRELDNA RLEHGAQILR MEETAREVGN KNAELCELIE FYRNRVEALE RLLLASNQEL1740
 1741 EELNSIQSNQ AEGVRDLGDT YSAAEGRQTE SDQDKERYQK LALDCKILQA KYRDAKDEIK1800
 1801 RCEKKIKDQR LEMEGKLEKM KNKMRSLYTA EVTRMKEKQE RDAAKSASEL EALTAQNAKY1860
 1861 EEHTRKLSNQ IVRLNEKILE QQKQHAIIST NLRHLQMQPI SETKPSSTTL TVSSSSSAPN1920
 1921 DDWQPFKRPN VPSSNLAMED EEGEVFNNTY LTDLKLGRVP ADMTAEELIY RNSLQPPHLK1980
 1981 STYAAQYDLG SQDEDLKDGP HSLDDSMSAL LSSSSTGTRK KSMGTHYKRP GPPTPSKNGG2040
 2041 RLSFGSSEPP REILREFGDH NNTSKTPARF KFLTQRFSVG SSGLPRDELP RRKRPNLLTG2100
 2101 IHRRRLRHAV DIFCTSTPRK SRSYYDQQRL IGATDADKSE AIETEDEVIE VEPDAVPELE2160
 2161 PLEDADQQGT PHLSTAALLA LTKGNTRRLT GTTKSKKGRV SLSLHGNIFA KSRPASFVAG2220
 2221 KRVQLRRKLR RDRIMGRFDE ARHLDQMRLS HSAQAAKSPE NNNYSLHNRN EEEHLPSENN2280
 2281 VMGKTVVLVG KRRLSPVVST TFNVEERSET SLLQQQFEHE NCVTWAMHGG ESVMMEETQN2340
 2341 DWYFEQLCKE TESTAPFQLQ PLDYKPLDEE QIEPKFTQLV AASCSNITTT SCATNMTGAS2400
 2401 SCTVYSIGSV HMQPLPQINI TYVQQPSDLQ QRRPTRHRSL MAQCRRFLRH LSLGQRLVMG2460
 2461 FALLVMVGLS LHLADKLVLV ITGILSGMGL VFLTYSCPGR N

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