YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88910855
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMITFMLTL SLTLSIILTT LNFWLAQTNP DPEKLSPYEC GFDPLGSARL PFSIRFFLVA  60
   61 ILFLLFDLEI ALLLPLPWAV QLQSPSTTLT WASVIIALLT LGLIYEWTQG GLEWAE

Type	Start	End	Confidence
Cytoplasmic	1	5	0.60
Transmembrane Helix	6	26	0.89
Non-Cytoplasmic	27	53	0.60
Transmembrane Helix	54	76	0.87
Cytoplasmic	77	86	0.53
Transmembrane Helix	87	108	0.89
Non-Cytoplasmic	109	116	0.62