YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|98961607, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVIHVSST QIPVAFMSAT KQSFRRASVI RCAANTPKKR YTIAVLPGDG VGNEVIPVAV  60
   61 DVLCLAGSLE GIDFSFEELP IGGVALDLVG VPLPKETLIR AKQSDALLLG AVGWYGIITI 120
  121 TFVHLKFGFI

Type	Start	End	Confidence
Cytoplasmic	1	105	0.90
Transmembrane Helix	106	125	0.92
Non-Cytoplasmic	126	130	0.70