YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|186500485, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSLRGDDY RNFFNHFSPF PLNTESEHVL PNDFKVDIHE IKGLRNYGIM SPAPWSGAYQ  60
   61 SFLNSLPSNP PNNTLTSLLV DEQTQLALVP ARTSTMESFS TSLSLLTVAI VSSNVPYVDD 120
  121 FSTNRVTTCT NSLYSFGFQT LMDPLSNYLF FLYVAFASTF VCCCYFALSL VIFVSLTTCN 180
  181 LVFIG

Type	Start	End	Confidence
Cytoplasmic	1	98	0.87
Transmembrane Helix	99	117	0.41
Non-Cytoplasmic	118	148	0.54
Transmembrane Helix	149	177	0.84
Cytoplasmic	178	185	0.41