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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89347106, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFLRHARH WLLLVVCLGA LGAYLAYNLH GEHERVEATE RERLATQSKV IEDNLSRQLV  60
   61 AINLALESIM VELPDWAGRP DGRELVSRRL KSMEVSMPSV RTFAVLDEKG TVTASNREEL 120
  121 LGRNFHDRDY FQTALRAPST KTLYVSAPFK TVLDTFVISV ARVITGPQGQ FAGLVSASVD 180
  181 PVDMQILLNS VRYADDMRSM LVHGDGTIFV SQPALVDVVG KNLSVAGSFF RQHLESKRPV 240
  241 SYFEGKAITT GDKRLPVLRT IQPADLTMDK PLVVSVSRGW DAMFAPWQRD VRSQLLVYAL 300
  301 FGLLCMAGLI IYQRQRVQQR MINQRLKLAT EATGVGIWEF DLKTRRYHWD LAMFGLFGLN 360
  361 PQTVNALNND WQQLLLPGEL LRMKDATRVT IKQGQAFDLT FQIRRQDGQV RFMRNRAVLY 420
  421 NDGSHAASRL IGTTEDVTER KLREADLRVA ATAFECQESI MVTDANQLIL RVNRAFTELF 480
  481 GYTAQDVLGA TPRVLQSGRH DPAFYAAMWD GITRGGAWQG EIWDRRKNGE CFPVWLSITV 540
  541 VCGDDGGVSH YVATHTDITL RKAAEDDIRQ LAFYDPLTGL PNRRLLQDRL HQAMSQARRE 600
  601 RGRLALLFLD LDKFKPVNDD FGHQAGDELL QAVAQRLQAC VRESDTVARL GGDEFVLLLP 660
  661 SIEAAQDAMA VAEKIHQAFG RPFTLSAGRN ATMSFSTGIA VYPEHASDEK ALMRHADEAM 720
  721 YQAKAAGRDR FVLFAPASEP ATLLTPADSG GTAPTIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle