YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95769404
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AALLLRHVGR HCLRAHLSPQ LCIRNAVPLG TTAKEEMERF WSKNTTLNRP LSPHISIYGW  60
   61 SLPMAMSICH RGTGIALSAG VSLFGLSALL VPGSFESHLE FVKSLCLGPA LIHTAKFALV 120
  121 FPLMYHTWNG IRHLMWDLGK GLTISQLHQS GVAVLVLTVL SSVGLAAM

Type	Start	End	Confidence
Cytoplasmic	1	71	0.83
Transmembrane Helix	72	91	0.92
Non-Cytoplasmic	92	104	0.64
Transmembrane Helix	105	128	0.78
Cytoplasmic	129	145	0.61
Transmembrane Helix	146	167	0.87
Non-Cytoplasmic	168	168	0.68