YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|95768912
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVLKYHLLPR TKGFTTAVQC LRGTVTAVYD VTLNFRGNKN PSLLGILYGK KYEADMCVRR  60
   61 FPLEEIPLDE KEAAQWLHKL YQEKDALQEI YNQKGVFPGQ QFKPTRRPWT LLNFLFWATL 120
  121 LLSPLFSFVL GVFASGSPLL ILTFLGFVGA ASFGVRRLIG VTEIEKGSSY GNQEFKKKE

Type	Start	End	Confidence
Cytoplasmic	1	110	0.99
Transmembrane Helix	111	132	0.91
Non-Cytoplasmic	133	138	0.72
Transmembrane Helix	139	160	0.90
Cytoplasmic	161	179	0.98