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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|95768791
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSTPSSSPSL RKRLQLLPTS RPPPEPEPGT MVEKGSDSSS EKGGVPGTPS TQSLGSRNFI  60
   61 RNSKKMQSWY SMLSPTYKQR NEDFRKLFSK LPEAERLIVD YSCALQREIL LQGRLYLSEN 120
  121 WICFYSNIFR WETTISIQLK EVTCLKKEKT AKLIPNAIQI CTENEKHFFT SFGARDRCFL 180
  181 LIFRLWQNAL LEKTLSPREL WHLVHQCYGS ELGLTSEDED YVCPLQLNGL GSPKDVGDVI 240
  241 ALSDITPSGA ADHSQEPSPA GSRRGRITPN LSRASSDADH GAEEDKEEQT DSQPDASSSQ 300
  301 TVTPVAEPPS AEPTPPDGPT SLGPLDLLPS EELLTDTSNS SSSTGEEADL AALLPDLSGR 360
  361 LLINSVFHVG AERLQQMLFS DSPFLQDFLQ QCKFTDVTLS PWSGDSKCHQ RRVLTYTIPI 420
  421 SNPLGPKSAS VVETQTLFRR GPQAGGCVVD SEVLTQGIPY QDYFYTAHRY CILGLARNKA 480
  481 RLRVSSEIRY RKQPWSLVKS LIEKNSWSGI EDYFHHLERE LAKAEKLSLE EGGKDTRGLL 540
  541 SGLRRRKRPL SWRAHGDGTP HPDPDPCART GMHTSGSLSS RFSEPSMDQG PGAGTPSALV 600
  601 LISIVLIVLI ALNVLLFYRL WSLERTAHTF ESWHSLALAK GKFPQTATEW AEILALQKQF 660
  661 HSVEVHKWRQ ILRASVELLD EMKFSLEKLH QGITVSDPPF DSQPQPDDSF S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle