YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114672225
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASGAMAK HEQILVLDPP TDLKFKGPFT DVVTTNLKLR NPSDRKVCFK VKTTAPRRYC  60
   61 VRPNSGIIDP GSTVTVSVML QPFDYDPNEK SKHKFMVQTI FAPPNTSDME AVWKEAKPDE 120
  121 LMDSKLRCVF EMPNENDKLG ITPPGNAPTV TSMSSINNTV ATPASYHTKD DPRGLSVLKQ 180
  181 EKQKNDMEPS KAVPLNASKQ DGPMPKPHSV SLNDTETRKL MEECKRLQGE MMKLSEENRH 240
  241 LRDEGLRLRK VAHSDKPGST STASFRDNVT SPLPSLLVVI AAIFIGFFLG KFIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	270	0.77
Transmembrane Helix	271	293	0.86
Cytoplasmic	294	294	0.76