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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94963134
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLLFLTCL VFSCLTISWL KIWGKMTDSK PLSNSKVDAS LLSSKEESFS ASDQSEEHGD  60
   61 CSCPLTTPDQ EELASHGGPV DASQQRNSVP SSHQKPPRNP LSSNDTCSSP ELQTNGVAAP 120
  121 GSEVPEANGL PFPARPQTQR TGSPTREDKK QAHIKRQLMT SFILGSLDDN SSDEDPSASS 180
  181 FQTSSRKGSR ASLGTLSQEA ALNTADPESH TPTMRPSMSG LHLVKRGREH KKLDLHRDFT 240
  241 VASPAEFVTR FGGNRVIETV LIANNGIAAV KCMRSIRRWA YEMFRNERAI RFVVMVTPED 300
  301 LKANAEYIKM ADQYVPVPGG PNNNNYANVE LIIDIAKRIP VQAVWAGWGH ASENPKLPEL 360
  361 LCKHEIAFLG PPSEAMWALG DKISSTIVAQ TLQIPTLPWS GSGLTVEWTE DSQHQGKCIS 420
  421 VPEDVYEQGC VRDVDEGLQA AEKVGFPLMI KASEGGGGKG IRRAESAEDF PMLFRQVQSE 480
  481 IPGSPIFLMK LAQNARHLEV QVLADQYGNA VSLFGRDCSI QRRHQKIIEE APATIAAPAV 540
  541 FEFMEQCAVL LAKTVGYVSA GTVEYLYSQD GSFHFLELNP RLQVEHPCTE MIADVNLPAA 600
  601 QLQIAMGVPL HRLKDIRLLY GESPWGVTPV SFETPLSPPI ARGHVIAARI TSENPDEGFK 660
  661 PSSGTVQELN FRSNKNVWGY FSVAAAGGLH EFADSQFGHC FSWGENREEA ISNMVVALKE 720
  721 LSIRGDFRTT VEYLVNLLET ESFQNNDIDT GWLDHLIAQR VQAEKPDIML GVVCGALNVA 780
  781 DAMFRTCMTE FLHSLERGQV LPADSLLNIV DVELIYGGIK YVLKVARQSL TMFVLIMNGC 840
  841 HIEIDAHRLN DGGLLLSYNG SSYTTYMKEE VDSYRITIGN KTCVFEKEND PTVLRSPSAG 900
  901 KLMQYTVEDG QHVEVGSSYA EMEVMKMIMT LNVQESGRVK YIKRPGAVLE AGCVVAKLEL 960
  961 DDPSKVHAAQ PFTGELPAQQ TLPILGERLH QVFHSVLENL TNVMNGYCLP EPFFSMKLKD1020
 1021 WVEKLMMTLR HPSLPLLELQ EIMTSVAGRI PVPVEKAVRR VMAQYASNIT SVLCQFPSQQ1080
 1081 IATILDCHAA TLQRKVDREA FFMNTQSIVQ LIQRYRSGTR GYMKAVVLDL LRRYLNVEHH1140
 1141 FQQAHYDKCV INLREQFKPD MTRVLDCIFS HSQVAKKNQL VTMLIDELCG PDPTLSEELT1200
 1201 SILKELTQLS RSEHCKVALR ARQVLIASHL PSYELRHNQV ESIFLSAIDM YGHQFCPENL1260
 1261 KKLILSETTI FDVLPTFFYH ANKVVCMASL EVYVRRGYIA YELNSLQHRE LPDGTCVVEF1320
 1321 QFMLPSSHPN RMAMPINVSD PDLLRHSKEL FMDSGFSPLC QRMGAMVAFR RFEEFTRNFD1380
 1381 EVISCFANVP TDTPLFSKAC TSLYSEEDSK SLQEEPIHIL NVAIQCADHM EDERLVPVFR1440
 1441 AFVQSKKHIL VDYGLRRITF LIAQEREFPK FFTFRARDEF AEDRIYRHLE PALAFQLELS1500
 1501 RMRNFDLTAV PCANHKMHLY LGAAKVKEGL EVTDHRFFIR AIIRHSDLIT KEASFEYLQN1560
 1561 EGERLLLEAM DELEVAFNNT SVRTDCNHIF LNFVPTVIMD PLKIEESVRA MVMRYGSRLW1620
 1621 KLRVLQAEVK INIRQTTSDC AVPIRLFITN ESGYYLDISL YKEVTDSRSG NIMFHSFGNK1680
 1681 QGSLHGMLIN TPYVTKDLLQ AKRFQAQSLG TTYVYDFPEM FRQALFKLWG SPEKYPKDIL1740
 1741 TYTELVLDSQ GQLVEMNRLP GCNEVGMVVF KMRFKTPEYP EGRDTIVIGN DITFQIGSFG1800
 1801 IGEDFLYLRA SEMARTEGIP QIYLAANSGA RMGLSEEIKQ IFQVAWVDPE DPYKGFRYLY1860
 1861 LTPQDYTQIS SQNSVHCKHI EDEGESRYVI VDVIGKDSSL GVENLRGSGM IAGEASLAYE1920
 1921 KNVTISMVTC RAIGIGAYLV RLGQRVIQVE NSHIILTGAG ALNKVLGREV YTSNNQLGGV1980
 1981 QIMHTNGVSH VTVPDDFEGV CTILEWLSYI PKDNQSPVPI ITPSDPIDRE IEFTPTKAPY2040
 2041 DPRWLLAGRP HPTLKGTWQS GFFDHGSFKE IMAPWAQTVV TGRARLGGIP VGVIAVETRS2100
 2101 VEVAVPADPA NLDSEAKIIQ QAGQVWFPDS AFKTAQVIRD FNQEHLPLMI FANWRGFSGG2160
 2161 MKDMYEQMLK FGAYIVDSLR LFKQPVLIYI PPGAELRGGA WVVLDSSINP LCIEMYADKE2220
 2221 SRGGVLEPEG TVEIKFRKKD LVKTIRRIDP VCKKLLGQLG TAQLPDKDRK ELESQLKARE2280
 2281 DLLLPIYHQV AVQFADLHDT PGHMLEKGII SDVLEWKTTR TYFYWRLRRL LLEAQVKQEI2340
 2341 LRASPELSHE HTQSMLRRWF VETEGAVKAY LWDSNQVVVQ WLEQHWSARD NLRSTIRENI2400
 2401 NYLKRDSVLK TIQSLVQEHP EATMDCVAYL SQHLTPAEQM QVVQLLSTTE SPASH

YRC Informatics Platform - Version 3.0
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