YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94968957, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLRRIAIL ALCTLFVLPA FGEEKFTTEL IPRSVLFGNP ERADPQISPD GKQLAYLAPV  60
   61 NGVLNVWVRT LGKTDDRAVT SDTNRGIRNF IWQYDDQHLL YLQDAGGDEN WRLYQTDIAT 120
  121 KQTKDLTPFD KVRVDIVAYS WKTPDAILVQ MNQRDPKVFD VHRVDLKTGK VTLDTQNPGD 180
  181 VASWQADNSL EVRAAQVSTD DGGTIIRVRN DVKSPWRDLM KWGPDETFGG VGGFTPDNRS 240
  241 LWVMTSLDAN AARLLEIDIA SGKQKVVSED PQFDVRATIN NPKTNALEAI SYAKDKTDYI 300
  301 FVDPKVKSDF AVLSKVHDGE IDSLSQSLDD NRWIVGYISD DAPEYWYLYD RPTQKATLLF 360
  361 SNRPQLEKYK LSKMQPIEYT ARDGMKLYGY LSTPAGMEAK NLPMVVFVHG GPWGRDEWGY 420
  421 NRYAQWLANR GYAVLQVNFR GSTGYGKKYV NAGDRQWAGS MHTDLLDGKD WVVKQGIADP 480
  481 AKVCIMGGSY GGYATLAGVT FAPDAFACGV DIVGPSNLNT LLKTIPPYWS TILSTFHKRM 540
  541 GDSEAVLTSQ SPLFKADQIK VPLLIGQGKN DPRVNVAESN QIVAAMRKNN KPVEYYIFPD 600
  601 EGHGFAKPTN NMAFNAASEE FLAKYLGGRA EPPSEAESKL LASIKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle