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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94967428, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGPVFYDPE RKRWRRLRMA LDITGVLATL LIVFFIVSIV RNTNVPSLGL TEAKKPYHAL  60
   61 KENQKRKYFR KASTHRKTKQ APSQVQLNTT EGIRAAFYVD WDAASFSSLK QYYPQIDLLF 120
  121 PEFLHVLTED GHIQGVTAEN KLFDVMDASG KVRPVDDKLM PYLKAEKAET EVFPLVNNFD 180
  181 PIANEWKSDI GDFLDDPASR ANFRKQIDAF LGSDRYRGLT LDFEEIPVDS MPGFEALVSE 240
  241 IYQDMHASGK KLYISVPAKN TDFNYEAVAK NSDGLILMNY DEHYPGGPAG AVASQDWFVE 300
  301 NLKFAVKHVP REKIICAISN YGYEWTTIGN AKLPQTAHTV STQEAWTTAE ESDADVELDG 360
  361 DALNPHITFM EGENARHDVW FTDGVTALNQ MRAAQQLGID TFALWRLGSE DRSLWNVWDR 420
  421 PGEQGAPDKL KDVPPGQDVD MEDAGEILQI EERPAPGQRT IKVDAETGLI SEEDFTKIPS 480
  481 PYRIARYGSS DKKIAITFDD GPDPTWTPKI MEVLDKYGVK GTFFLIGVQA EKYPGVMKKL 540
  541 YDDGHEIGNH TFTHPDISSV SRSYFKTVEL NLTERLFAAK LGVKPVLFRP PYSIDQEPDT 600
  601 ADQVGPLELA QDMGYITVGD KIDTNDWRDD PRKTAPEMFT EVMNNLPPCK PTNFLTCGNV 660
  661 ILMHDGGGDR SETVKALNLI IPAMQARGYK IVPVSELLGK TRAEVMPPIS KNERWAAMVA 720
  721 SLSFILFGAV SQFIIAVFFV GDVLMTGRLV FIGTLAIYDR IRGPRLTADP DYRPAVAVLI 780
  781 PAYNEEKVIE RTVRSVLDSD YPKLRAIVID DGSKDATVEV VEQLFAAEIA SGKVTLLTKP 840
  841 NSGKAAALNY GLEFVTEEIF VGIDADTIIA PDAIGLLVPH FQNPKIAAIA GNAKVGNRVN 900
  901 WWTRWQALEY ITSQNFERRA LDVFGAVSVV PGAIGAWRTE AVLAAGKYHH DTVAEDADLT 960
  961 MALLQDGYRV EYEDLALAYT EAPSTANGLM RQRFRWSFGI MQSVYKHRSA FKQGGALGWF1020
 1021 ALPNVVIFQI LLPLVSPFID LMFLFGAGSY AWNRYMHPES TDPSSFHKLV LYFALFLVID1080
 1081 FVASTIAFTL ERRQPGGQKD FWLLAHVWLQ RFAYRQLFSI VLIKTLKRAI EGGEFAWDKL1140
 1141 ERMASVKPVG VHTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle