YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94986288, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERGKTALH RSVSHLRYPS PVKRTVLLTL LACALGTAAA RDLAAIKASG TIYVGTEPTY  60
   61 APFTYTQGKK IVGFEAELAE ALAKRMGVKV EWRPSAFDTL LIGLNQDRFD MVISSHGITP 120
  121 ERQKAVDFAH PHYCSGGVIL ARENGPLTVD ALQGKTVAVQ LGTTYAQRAQ KLPGLSSVKT 180
  181 YPTNADALQM LLSGRVDAFI TDRFVALEAR KKFPQAGLKL GQLLFQEKIG IAVKKGNTPL 240
  241 VSAINQALQG MLNDGSYKKL SEKYFGEDIR CR

Type	Start	End	Confidence
Signal Peptide	1	40	0.99
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	272	0.99