YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157127679, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEISDTQKI GVGLAGFGIA FLFLGVLLLF DKGLLAIGNI LFICGLACVI GLERTFRFFF  60
   61 QKHKVKASIA FFGGILIVLL GYPLIGMLIE TYGFILLFSG FFPVAINFLR RVPILGNFLN 120
  121 MPGVSKVVDR LAGDSNRTTV

Type	Start	End	Confidence
Cytoplasmic	1	9	0.93
Transmembrane Helix	10	29	0.96
Non-Cytoplasmic	30	34	0.80
Transmembrane Helix	35	56	0.90
Cytoplasmic	57	66	0.84
Transmembrane Helix	67	86	0.93
Non-Cytoplasmic	87	91	0.76
Transmembrane Helix	92	111	0.89
Cytoplasmic	112	140	0.93