YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94469118
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTVSAAEL MATNIVHAEA AEAPTLPKGH PPVGEVKMAS GGGANPPPEC PMHNKEQAIK  60
   61 EKPILVSECP VKHDDSDINP LNMMPPMNQN PAPDQPFPLP KDRQVSSIPK VTEDGRQEFW 120
  121 VYPSQQMFWN AMLRKGWRWQ KDDIAPKDMD DIIKIHNANN EQAWQEVLKW EALHARECGN 180
  181 PKLKSFGGKA TEYSPRARMR SWLGYELPFD RHDWIVDRCG KDVRYIIDYY DGGMVDDKYK 240
  241 FALLDVRPAM DSPENVWDRM KVCYMRWKFQ LESKVKQLSN

Type	Start	End	Confidence
Signal Peptide	1	18	0.51
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	280	0.99