YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157120010, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLILRNAC RRTLLQNQQS AGPLLAVRTV VLKPVQPDNR PGESHDDRNA RLQRPQSPHL  60
   61 TIYAPQLTSM LSITHRMTGM ALAGYATMMG LGALALPHDA THYLTMLEGL SAPTLMALKF 120
  121 TLAYPFAFHS VNGVRHLFWD MGKFLTIKEV YSTGYTMLLV SGVVAAALTF L

Type	Start	End	Confidence
Cytoplasmic	1	76	0.98
Transmembrane Helix	77	97	0.90
Non-Cytoplasmic	98	114	0.76
Transmembrane Helix	115	139	0.73
Cytoplasmic	140	149	0.88
Transmembrane Helix	150	170	0.90
Non-Cytoplasmic	171	171	0.95