YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94676776, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPLILIVT IVYLMLCASL FVVQEGQRGI VLRFGKVLRD RDEKPLIYNP GLHIKIPFIE  60
   61 TVKNLDARIQ TMENQADRFV TMEKKDLIVD SYIKWRISDF SRYYLATGGG EISQAEVLLK 120
  121 RKFSDRLRSE LGRLHVKGIV TDSRNQLMTD VREALNHGTS GDEDELQATD HAIASAAARV 180
  181 ERETKGSQSA AVNSNSMAAL GIQVVDVRIK QINLPTEVFD AIYQRMRAER EAVARRHRSQ 240
  241 GQEEAEKLRA TADYEVTRTL AEAERQSLII RGEADAQTAK LYADAFSIDP AFYAFIRTLR 300
  301 AYENSFNDKN NFIILSPESD FLRFMKSPGH WHE

Type	Start	End	Confidence
Signal Peptide	1	24	0.84
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	333	0.98