YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURC_BAUCH
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYQRLAQLQ KLVPQMRQVK RIHFIGIGGV GMSGIAKILL HEGYQISGSD LVQNKVTKHL  60
   61 VALGVSIKFQ HIPENVLDAN VVVVSSAISI ANPEIVAAKK LRIPIITRAE MLAELMRFRY 120
  121 GIAIAGTHGK TTTTAMLASI YLEAGLDPTI VNGGLIKSIG QYARLGYGSY LIAEADESDL 180
  181 SFLHLQPIVT IITNIEADHM ENYQGDFNYL KNTFLKFIHK LPFYGKGIMC LDDPVIRDLL 240
  241 PHISRHIITY GFNSKANFRL TNYHQKEAHV SFQLYRQDKP TLRIELNSPG RHNALNAVAA 300
  301 IAVATEEGIA DKNILQALFR FKGINRRFDK LGCFSLKKIN GKNGVVMLVE DYGHHPTELQ 360
  361 ATIQSVRIGW PDKRLVMVFQ PHRYTRTRDL YEYFVGVLSK VDVLLMLDIY PAGENPIAGI 420
  421 DSKSLCCTIR NTSKLDPIFI HELNKLPVML AQLLQDNDLV LMQGAGSIGL IASQLAIGKL 480
  481 QTNIRHNPLI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	41	0.89
Non-Cytoplasmic	42	490	0.94