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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94450856
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLCLLGSSS GSCHSGIGVR IGVVDKGIHQ YTDLSFVLQF LHYYTCSFSK FRNFSVTFSI  60
   61 ISAFFLVCFT QQAEALKMHT DLKVGMYWGD MGVDFWDSST WKQEVDKYEV LVMTPAILLD 120
  121 ALRHSFLSLS MIKVLIVDEC HHAGGKHPYA CIMREFYHKE LNSGTSNVPR IFGMTASLVK 180
  181 TKGENLDSYW KKIHELETLM NSKVYTCENE SVLAGFVPFS TPSFKYYQHI KIPSPKRASL 240
  241 VEKLERLTIK HRLSLGTLDL NSSTVDSVEK RLLRISSTLT YCLDDLGILL AQKAAQSLSA 300
  301 SQNDSFLWGE LNMFSVALVK KFCSDASQEF LAEIPQGLNW SVANINGNAE AGLLTLKTVC 360
  361 LIETLLGYSS LENIRCIIFV DRVITAIVLE SLLAEILPNC NNWKTKYVAG NNSGLQNQTR 420
  421 KKQNEIVEDF RRGLVNIIVA TSILEEGLDV QSCNLVIRFD PASNICSFIQ SRGRARMQNS 480
  481 DYLMMVESGD LLTQSRSMKY LSGGKRMREE SLDHSLVPCP PLPDDSDEPL FRVESTGATV 540
  541 TLSSSVSLIY HYCSRLPSDE YFKPAPRFDV NKDQGSCTLY LPKSCPVKEV KAEANNKVLK 600
  601 QAVCLKACIQ LHKVGALSDH LVPDMVVAET VSQKLEKIQY NTEQPCYFPP ELVSQFSAQP 660
  661 ETTYHFYLIR MKPNSPRNLH LNDVLLGTRV VLEDDIGNTS FRLEDHRGTI AVTLSYVGAF 720
  721 HLTREEVLFC RRFQITLFRV LLDHSVENLM EALNGLHLRD GVALDYLLVP STHSHETSLI 780
  781 DWEVIRSVNL TSHEVLEKHE NCSTNGASRI LHTKDGLFCT CVVQNALVYT PHNGYVYCTK 840
  841 GVLNNLNGNS LLTKRNSGDQ TYIEYYEERH GIQLNFVDEP LLNGRHIFTL HSYLHMAKKK 900
  901 KEKEHDREFV ELPPELCHVI LSPISVDMIY SYTFIPSVMQ RIESLLIAYN LKKSIPKVNI 960
  961 PTIKVLEAIT TKKCEDQFHL ESLETLGDSF LKYAVCQQLF QHCHTHHEGL LSTKKDGMIS1020
 1021 NVMLCQFGCQ QKLQGFIRDE CFEPKGWMVP GQSSAAYSLV NDTLPESRNI YVASRRNLKR1080
 1081 KSVADVVESL IGAYLSEGGE LAALMFMNWV GIKVDLTTTK IQRDSPIQAE KLVNVGYMES1140
 1141 LLNYSFEDKS LLVEALTHGS YMMPEIPRCY QRLEFLGDSV LDYLITKHLY DKYPCLSPGL1200
 1201 LTDMRSASVN NECYALVAVK ANLHKHILYA SHHLHKHISR TVSEFEQSSL QSTFGWESDI1260
 1261 SFPKVLGDVI ESLAGAIFVD SGYNKEVVFA SIKPLLGCMI TPETVKLHPV RELTELCQKW1320
 1321 QFELSKAKDF DSFTVEVKAK EMSFAHTAKA SDKKMAKKLA YKEVLNLLKN SLDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle